Cell Atlas

Dataset

Human fetal BM CITE-seq dataset [PROTEIN]

A CITE-seq dataset containing combined single cell RNA and protein data (k=8,978) for 3 human fetal BM samples at 16-17 post-conception weeks. This contains 32 discrete progenitor, myeloid, lymphoid and stromal cell-states. The protein panel consists of 198 antibodies.
Author
DOI
Filename: 080421_mq224_postQC_postDSB_postUMAP_celllabels_MNCs_ADTonmRNA_xSimone.h5ad; Download

Observations

AnnData object with n_obs × n_vars = 8978 × 198
    obs: 'cell.labels', 'lanes', 'sequencing.type', 'sex', 'orig.ident'
    var: 'bg_mean'
    uns: 'assignment_colors', 'cell.labels_colors', 'draw_graph', 'leiden', 'leiden_colors', 'louvain', 'neighbors', 'pca', 'umap'
    obsm: 'X_umap'
    varm: 'PCs'
    obsp: 'connectivities', 'distances'

Scatterplot Heatmap Analysis
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